diff --git a/Makefile b/Makefile
index 9d8364e89..62fdd0f64 100644
--- a/Makefile
+++ b/Makefile
@@ -42,8 +42,8 @@ dist: all
 	mkdir -p atmosphere-$(AMSVER)/atmosphere/titles/0100000000000036
 	mkdir -p atmosphere-$(AMSVER)/atmosphere/titles/0100000000000034
 	mkdir -p atmosphere-$(AMSVER)/atmosphere/titles/0100000000000032
-	cp fusee/fusee-secondary/fusee-secondary.bin atmosphere-$(AMSVER)/fusee-secondary.bin
-	cp common/defaults/BCT.ini atmosphere-$(AMSVER)/BCT.ini
+	cp fusee/fusee-secondary/fusee-secondary.bin atmosphere-$(AMSVER)/atmosphere/fusee-secondary.bin
+	cp common/defaults/BCT.ini atmosphere-$(AMSVER)/atmosphere/BCT.ini
 	cp common/defaults/loader.ini atmosphere-$(AMSVER)/atmosphere/loader.ini
 	cp -r common/defaults/kip_patches atmosphere-$(AMSVER)/atmosphere/kip_patches
 	cp stratosphere/creport/creport.nsp atmosphere-$(AMSVER)/atmosphere/titles/0100000000000036/exefs.nsp
diff --git a/common/defaults/BCT.ini b/common/defaults/BCT.ini
index 81d69e48e..660b456b7 100644
--- a/common/defaults/BCT.ini
+++ b/common/defaults/BCT.ini
@@ -1,6 +1,6 @@
 BCT0
 [stage1]
-stage2_path = fusee-secondary.bin
+stage2_path = atmosphere/fusee-secondary.bin
 stage2_addr = 0xF0000000
 stage2_entrypoint = 0xF0000000
 
diff --git a/fusee/fusee-primary/src/main.c b/fusee/fusee-primary/src/main.c
index 130362e0a..9c5e81def 100644
--- a/fusee/fusee-primary/src/main.c
+++ b/fusee/fusee-primary/src/main.c
@@ -40,12 +40,12 @@ static char g_bct0_buffer[BCTO_MAX_SIZE];
 #define DEFAULT_BCT0_FOR_DEBUG \
 "BCT0\n"\
 "[stage1]\n"\
-"stage2_path = fusee-secondary.bin\n"\
+"stage2_path = atmosphere/fusee-secondary.bin\n"\
 "stage2_addr = 0xF0000000\n"\
 "stage2_entrypoint = 0xF0000000\n"
 
 static const char *load_config(void) {
-    if (!read_from_file(g_bct0_buffer, BCTO_MAX_SIZE, "BCT.ini")) {
+    if (!read_from_file(g_bct0_buffer, BCTO_MAX_SIZE, "atmosphere/BCT.ini")) {
         print(SCREEN_LOG_LEVEL_DEBUG, "Failed to read BCT0 from SD!\n");
         print(SCREEN_LOG_LEVEL_DEBUG, "Using default BCT0!\n");
         memcpy(g_bct0_buffer, DEFAULT_BCT0_FOR_DEBUG, sizeof(DEFAULT_BCT0_FOR_DEBUG));
@@ -159,7 +159,7 @@ int main(void) {
     strcpy(g_chainloader_arg_data, stage2_path);
     stage2_args = (stage2_args_t *)(g_chainloader_arg_data + strlen(stage2_path) + 1); /* May be unaligned. */
     memcpy(&stage2_args->version, &stage2_version, 4);
-    stage2_args->log_level = log_level;
+    memcpy(&stage2_args->log_level, &log_level, sizeof(log_level));
     stage2_args->display_initialized = false;
     strcpy(stage2_args->bct0, bct0);
     g_chainloader_argc = 2;